Demir, E. - A Web Based Annotated Bibliography - Aigaion 2.0

BROWSE
SORT BY
- Author
- Title
- Type/Journal
- Journal Name
- Year
- Recently added
SITE
- Help
- About this site
GUEST USER
guest
LOGIN
Name:

Password:

Deutsch, English, Nederlands, Norsk, <more...>

Dear guest, welcome to this publication database. As an anonymous user, you will probably not have edit rights. Also, the collapse status of the topic tree will not be persistent. If you like to have these and other options enabled, you might ask Admin for a login account.

This site is powered by Aigaion - A PHP/Web based management system for shared and annotated bibliographies. For more information visit www.aigaion.nl.

First name(s):	E.
Last name(s):	Demir

Babur, O., Demir, E., Gonen, M., Sander, C. and Dogrusoz, U., Discovering Modulators of Gene Expression (2011), in: Nucleic Acids Research, 38(5648-5656)

Demir, E. and Aykanat, C., Efficient Successor Retrieval Operations for Aggregate Query Processing on Clustered Road Networks (2011), in: Information Sciences, 180(2743-2762)

Demir, E., Cary, M., Paley, S., Fukuda, K., .., Dogrusoz, U., Sander, C. and Bader, G., The BioPAX community standard for pathway data sharing (2011), in: Nature Biotechnology, 28(935-942)

Demir, E., Aykanat, C. and Barla-Cambazoglu, B, A link-based storage scheme for efficient aggregate query processing on clustered road networks (2010), in: Information systems, 35(75-93)

Dogrusoz, U., Cetintas, A., Demir, E. and Babur, O., Algorithms for effective querying of compound graph-based pathway databases (2010), in: BMC Bioinformatics, 10(376--1-16)

Babur, O., Dogrusoz, U., Demir, E. and Sander, C., chiBE: Iterative visualization and manipulation of BioPAX pathways models (2010), in: Bioinformatics, 26(429-431)

LeNovere, N, Hucka, M., Mi, H., Moodie, S., Schreiber, F., Sorokin, A., Demir, E., Wegner, K., Aladjem, M.I., Wimalaratne, S.M., Bergman, F.T., Gauges, R., Ghaza, P., Kawaji, H., Li, L., Matsuoka, Y, .., Dogrusoz, U., Freeman, T., Funahashi, A. and Kitano, H., The Systems Biology Graphical Notation (2010), in: Nature Biotechnology, 27(735-741)

Dogrusoz, U., Giral, E., Cetintas, A., Civril, A. and Demir, E., A Layout Algorithm for Undirected Compound Graphs (2009), in: Information Sciences, 179(980-994)

Babur, O., Colak, R., Demir, E. and Dogrusoz, U., PATIKAmad: analysis of pathways using microarray data (2009), in: Proteomics, 8(2196-2198)

Demir, E., Aykanat, C. and Cambazoglu, B.B., Clustering Spatial Networks for Aggregate Query Processing, a Hypergraph Approach (2008), in: Information Systems, 33(1-17)

Altingovde, A., Demir, E., Can, F. and Ulusoy, O., Incremental Cluster-Based Retrieval Using Compressed Cluster-Skipping Inverted Files (2008), in: ACM Trans on Information Systems, 26(15-1--36)

Altingovde, I.S., Demir, E., Can, F. and Ulusoy, O., Incremental Cluster-Based-Retrieval Using Compressed Cluster Skipping Inverted Files (2008), in: ACM Trans on Information Systems, 26

Dogrusoz, U., Erson, E.Z., Giral, E., Demir, E., Babur, O., Cetintas, A. and Colak, R., PATIKAweb: a Web interface for analyzing biological pathways through advanced querying and visualization (2006), in: Bioinformatics, 22(374-375)

Dogrusoz, U., Giral, E., Cetintas, A., Civril, A. and Demir, E., A Compound Graph Layout Algorithm for Biological Pathways (2005), in: Lecture Notes in Computer Science, 3383(442-447)

Can, F., Altingovde, I.S. and Demir, E., Efficiency and effectiveness of query processing in cluster-based retrieval (2005), in: Information Systems, 29(697-717)

Demir, E., Babur, O., Dogrusoz, U., Gursoy, A., Ayaz, A., Gulesir, G., Nisanci, G. and Cetin-Atalay, R., An ontology for collaborative construction and analysis of cellular pathways (2004), in: Bioinformatics, 20(349-356)

Demir, E., Babur, O., Dogrusoz, U., Gursoy, A., Ayaz, A., Gulesir, G., Nisanci, G. and Cetin-Atalay, R., An Ontology for Collaborative Construction and Analysis of Cellular Pathways (2004), in: Bioinformatics, 20(349-356)

Demir, E., Babur, O., Dogrusoz, U., Gursoy, A., Nisanci, G., Cetin-Atalay, R. and Ozturk, M., PATIKA: An integrated visual environment for collaborative construction and analysis of cellular pathways (2003), in: Bioinformatics, 18(996-1003)

Demir, E., Babur, O., Dogrusoz, U., Gursoy, A., Nisanci, G., Cetin-Atalay, R. and Ozturk, M., PATIKA: An integrated Visual environment for collaborative construction and analysis of cellular pathways (2003), in: Bioinformatics, 18(996-1003)

Demir, E., Babur, O., Dogrusoz, U., Gursoy, A., Nisanci, G., Cetin-Atalay, R. and Ozturk, M., PATIKA: An Integrated Visual Environment for Collaborative Construction and Analysis of Cellular Pathways (2003), in: Bioinformatics, 18(996-1003)

processing time: 0.2008 seconds.